Error while Installing DESeq2
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@kkathirvel93-15409
Last seen 6.6 years ago

Hi all,

 I am new to R. I am trying install DESeq2 in R for RNA-Seq data analysis. But i am getting this error at the end.....

1: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘XML’ had non-zero exit status
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘annotate’ had non-zero exit status
3: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘genefilter’ had non-zero exit status
4: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘geneplotter’ had non-zero exit status
5: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘DESeq2’ had non-zero exit status

I am working in Ubuntu 16.04 . Can anyone help me out.. Thanks in advance

software error R deseq2 rnaseq • 1.9k views
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@mikelove
Last seen 2 days ago
United States

See instructions here:

https://bioconductor.org/install

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