How to retrieve the intensity of probes (PM and MM) and the order of probes in the probe set?
0
0
Entering edit mode
@szhanuoguelphca-892
Last seen 10.1 years ago
Hello, Bioconductor users, I am working on gene expression data generated by Affymetrix chip ATH1-121501. Is it possible to retrieve the intensities of probes (PM and MM)in each probe set using cel files and cdfenvironments from ath1121501cdf package? Is it possible to find the order of probes in the probe set or genomic locations of probes for corresponding genes using matchprobes package? Can you share your experience how to do it or similar work? Thank you in advance! Joshua
cdf probe matchprobes cdf probe matchprobes • 823 views
ADD COMMENT

Login before adding your answer.

Traffic: 537 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6