problem using AnnotationDbi

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h72ghorashi • 0

@h72ghorashi-14959

Last seen 7.0 years ago

Hi,

I'm new to bioconductor and I'm trying to install the package "AnnotationDbi" using the code below:

source("http://bioconductor.org/biocLite.R")

biocLite("AnnotationDbi")

library("AnnotationDbi")

but this gives the error below:

Error: package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 there is no package called ‘digest’

Can anyone please help me to find out what the problem is?

annotationdbi bioconductor • 3.8k views

ADD COMMENT • link 7.0 years ago h72ghorashi • 0

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Based on this error: there is no package called ‘digest’, it likely means you have to install the package digest first.

source("https://bioconductor.org/biocLite.R")
biocLite("digest")

ADD REPLY • link 7.0 years ago Guido Hooiveld ★ 4.1k

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Thank you, it really worked :)

ADD REPLY • link 7.0 years ago h72ghorashi • 0

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