How can I remove the ellipsis and get the complete sequence and results?
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xieduo ▴ 10
@xieduo-14835
Last seen 6.8 years ago

Dear all,

We I use the KEGGREST,I come across a problem. When I use the function keggGet(c("hsa:10458"),"ntseq"), I get the result showed below

> library("KEGGREST")
> keggGet(c("hsa:10458"),"ntseq")
  A DNAStringSet instance of length 1
    width seq                                               names
[1]  1659 ATGTCTCTGTCTCGCTCAGAGGA...CCCGCACCCTGGCTGGAAGATGA hsa:10458 K05627 ...

However, how can I remove the ellipsis and get the complete sequence and results? Thank you!

keggrest biostrings • 1.1k views
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shepherl 4.1k
@lshep
Last seen 1 hour ago
United States

Using as.character() on your DNAStringSet might be the desired output. You can also get more information on using and working with DNAStringSets by looking at the help page ?DNAStringSet

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