Hi all,
I would be grateful for help on the following issue.
When running the function msa from package I get the following error:
"Error in .Primitive("c")(<S4 object of class "IRanges">) : could not find symbol "recursive" in environment of the generic function"
I have just upgraded R to version 3.4.3. I have also reinstalled some Bioconductor packages (BiocGenerics", "XVector", "S4Vectors", "IRanges", "GenomicRanges") and msa, but It doesn't work
Thanks!
sessionInfo()
R version 3.4.3 (2017-11-30)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.3 LTS
Matrix products: default
BLAS: /usr/lib/libblas/libblas.so.3.6.0
LAPACK: /usr/lib/lapack/liblapack.so.3.6.0
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=es_ES.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=es_ES.UTF-8 LC_MESSAGES=en_US.UTF-8 LC_PAPER=es_ES.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=es_ES.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats4 parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] BiocInstaller_1.20.3 msa_1.2.1 Biostrings_2.38.4 XVector_0.10.0 IRanges_2.4.8 S4Vectors_0.8.11
[7] BiocGenerics_0.16.1
loaded via a namespace (and not attached):
[1] zlibbioc_1.16.0 compiler_3.4.3 tools_3.4.3 Rcpp_0.12.14
