Hi,

I am trying to analyze Illumina 450K methylation array data with Champ version 2.8.9

and getting the following error when run champ.svd() :

Error in summary(lm(svd.o$v[, c] ~ PhenoTypes.lv[[f]]))$coeff[2, 4] : 
  subscript out of bounds

Any ideas or help is appreciated.

THANKS!