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10 years, 3 months ago
Australia
C: Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
10 years, 3 months ago
United States
derfinder: fullCoverage() problems
10 years, 3 months ago
United Kingdom
A: how to use biomaRt with ensembl build 37
10 years, 3 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
10 years, 3 months ago
WEHI, Melbourne, Australia
A: Packages for GO and KEGG analysis on RNAseq data
10 years, 4 months ago
United Kingdom
A: how to use biomaRt with ensembl build 37
10 years, 4 months ago
Spain/Barcelona/Centre for Genomic Regu…
Gene set analysis with CAMERA
10 years, 4 months ago
United States
A: biomaRt SNP (rs ID) -to-HGNC symbol mapping question
10 years, 4 months ago
United States
A: Using edgeR on pre-post treatment control design
10 years, 4 months ago
The city by the bay
How to use dispersion estimated from one dataset in another dataset in EdgeR
10 years, 4 months ago
10 years, 4 months ago
EMBL European Molecular Biology Laborat…
A: DESeq2 timecourse - How to set the experimental design
10 years, 4 months ago
The city by the bay
A: How to use dispersion estimated from one dataset in another dataset in EdgeR
10 years, 4 months ago
USA
how to save file on local disk after applying predictCoding() function?
10 years, 4 months ago
United States
A: Annotation from Submitter GPL in GSE dataset
10 years, 4 months ago
USA
A: how to save file on local disk after applying predictCoding() function?
10 years, 4 months ago
United States
Select the annotation level during GO enrichment
10 years, 4 months ago
United States
A: Use R/Bioconductor to match BLAST hits to GO terms?
10 years, 4 months ago
United States
Select the annotation level during GO enrichment
10 years, 4 months ago
Bioinformatics Laboratory, Academic Med…
Limma Voom produces many identical adjusted p-values
10 years, 4 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
10 years, 4 months ago
WEHI, Melbourne, Australia
A: Should I skip the eBayes step when using Limma for Affymetrix miRNA v1 chip?
10 years, 4 months ago
United States
Using RNA-Seq raw count data in Weighted Gene Co-Expression Network Analysis
10 years, 4 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
10 years, 4 months ago
WEHI, Melbourne, Australia
A: EdgeR Differential Expression analysis with NAs
10 years, 4 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
10 years, 4 months ago
United States
A: RMySQL availiability with Bioconductor 3.0
10 years, 4 months ago
The city by the bay
what causes the difference in the topTable results by the two analyses using limma?
10 years, 4 months ago
United States
A: Analyzing RNA-Seq data without replicates using DESeq
10 years, 4 months ago
Seattle, WA, United States
Algorithm description for matchPWM (Biostrings)
10 years, 4 months ago
Seattle, WA, United States
A: Algorithm description for matchPWM (Biostrings)
10 years, 4 months ago
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Bioinformatics researching Schizophrenia
11 years, 2 months ago
United States
A: Differential expression of RNA-seq data using limma and voom()
11 years, 6 months ago
United States
A: ComBat: Could it utilize technical replicates?
11 years, 8 months ago
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