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Created An Answer That Has Been Accepted
Awarded 5061 times (see all awards). Earned by the
following contributors:
8 years, 3 months ago
United States
A: DESEQ2: high number of differentially expressed genes with very high fold chang
8 years, 3 months ago
United States
A: DESeq2: Question regarding changes between Bioconductor 3.2 and 3.4 or recent ve
8 years, 3 months ago
United States
A: DESEQ2: Can we analyse pair of technical replicates as biological replicates to
8 years, 3 months ago
United States
A: Is it possible to perform analysis on two separate DESeq2 objects?
8 years, 4 months ago
United States
A: DESeq2 error when attempting to normalize counts
8 years, 5 months ago
United States
A: design parameter for multi-factor combinations
8 years, 5 months ago
United States
A: Any trick to use "tximport" for converting a simple read count table ?
8 years, 6 months ago
United States
A: DESeq2 3-fatcor design and different interaction terms
8 years, 6 months ago
United States
A: DESeq2: Appropriate way to deal with knockouts in experiment design (RIPSeq)
8 years, 7 months ago
United States
A: DESeq2 counts and output variables are Numbers instead of Sample Names
8 years, 7 months ago
United States
A: Gene level exploratory data analysis from tximport results
8 years, 8 months ago
United States
A: How to find genes causing the high variance of one replicate in the PCA
8 years, 8 months ago
United States
A: [DESeq2] How to compute the predicted values of a model?
8 years, 8 months ago
United States
A: locfunc position in estimateSizeFactorsForMatrix function
8 years, 8 months ago
United States
A: should I use rsem's summary to genes or tximport's?
8 years, 8 months ago
United States
A: DEGs : finding DE genes specific for one condition
8 years, 8 months ago
United States
A: Clarification on DESeq2 normalizationFactors(), estimateDispersions() and varian
8 years, 8 months ago
United States
A: DESeq2 multifactor and paired sample analysis
8 years, 9 months ago
United States
DESeq2 results(): 'name' argument and ?equivalent? numeric contrast produce different results
8 years, 9 months ago
United States
DEseq2 - Use normalized DEseq2 counts to plot most expressed genes per group
8 years, 9 months ago
United States
DESeq2: Question regarding changes between Bioconductor 3.2 and 3.4 or recent version changes
8 years, 9 months ago
United States
DESEQ2: high number of differentially expressed genes with very high fold change
8 years, 9 months ago
United States
DESeq2 normFactors method: Error in fitBetaWrapper
8 years, 9 months ago
United States
deseq local or parametric fit results in different DE genes
8 years, 9 months ago
United States
DESeq2 3-fatcor design and different interaction terms
8 years, 9 months ago
United States
DESEQ2: Can we analyse pair of technical replicates as biological replicates to get p-values ? What will be the effect ?
8 years, 9 months ago
United States
DESeq2 "summarizeOverlaps" "se" not working, freezing, or too slow
8 years, 9 months ago
United States
Possible ways of performing differential gene expression and analysis of RNA-Seq data from normalized counts of RSEM software
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