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4 years, 9 months ago
United States
How to post Salmon data to GEO for use with tximeta
4 years, 11 months ago
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Postdoctoral position in statistical genomics (UNC Chapel Hill)
5 years, 5 months ago
United States
Updated DESeq2 performance on highly replicated yeast RNA-seq data
6 years ago
United States
DESeq2: Error from the generic function 'plotMA' defined in package 'BiocGenerics'
6 years, 6 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
6 years, 8 months ago
United States
DESeq2: Error from the generic function 'plotMA' defined in package 'BiocGenerics'
7 years, 7 months ago
United States
Problem elaborating contrasts for DESeq2 analysis
7 years, 7 months ago
United States
DESeq2: Error from the generic function 'plotMA' defined in package 'BiocGenerics'
7 years, 7 months ago
United States
Questions about multi-factor contrast setting in DESeq2
7 years, 7 months ago
United States
DESeq2 with data containing 3 factors or more and outlier detection
7 years, 7 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
7 years, 9 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
7 years, 9 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
7 years, 11 months ago
United States
DESeq2: Error from the generic function 'plotMA' defined in package 'BiocGenerics'
8 years ago
United States
Feature request: columns and keytypes of organism packages in vignette
8 years, 5 months ago
United States
AnnotationHub and ExperimentHub make "~" directory in my home
8 years, 5 months ago
United States
Variance stabilizing transformation seems not working on NGS (bacterial 16srRNA based) data
8 years, 9 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
8 years, 9 months ago
United States
DESeq2: Error from the generic function 'plotMA' defined in package 'BiocGenerics'
8 years, 10 months ago
United States
DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
9 years, 4 months ago
United States
Rsubread align() output_file, dir not created first
9 years, 9 months ago
United States
Subset SummarizedExperiment/GRangesList by seqnames
10 years, 8 months ago
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base R and genefilter have opposite definitions of anyNA()
10 years, 9 months ago
United States
phyloseq/DESeq gives negative transformed values
10 years, 10 months ago
United States
DESeq2 extracting results in version >= 1.3 (was: "using DESeq2 with multi factor data")
10 years, 10 months ago
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Data Analysis for Genomics, free HarvardX course, starts April 7
11 years ago
United States
DESeq2 high fold change values for comparison of samples with zero counts
11 years, 3 months ago
United States
biomaRt : cannot useMart with biomart.informatics.jax.org because host="lindon"
11 years, 8 months ago
United States
summarizeOverlaps, inter.feature=FALSE and mode="IntersectionNotEmpty"
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