Popular Question

Created A Question With More Than 1,000 Views

Awarded 8352 times (see all awards). Earned by the following contributors:
kalavattam ▴ 10
4 years, 10 months ago
United States
Is this an issue? "Error in (function (x) : attempt to apply non-function" when calling tximeta::summarizeToGene(se) for the first time with some datasets.
firestar ▴ 20
4 years, 10 months ago
Sweden
batchelor batch correction correction runs into errors
adR ▴ 40
4 years, 10 months ago
Germany, München
how to do normalization using edgeR
maltethodberg ▴ 180
4 years, 10 months ago
Denmark
EBImage: Annotate multiple images in a grid with display()?
Assa Yeroslaviz ★ 1.5k
4 years, 10 months ago
Germany
ChIPSeeker with Ensembl IDs
shepherl 4.1k
4 years, 10 months ago
United States
Last Day to Submit New Packages for Bioconductor Release 3.11
mpuli011 • 0
4 years, 10 months ago
United States
Removing low sequences before analysis
mpuli011 • 0
4 years, 10 months ago
United States
Plotting change over time
svlachavas ▴ 840
4 years, 10 months ago
Germany/Heidelberg/German Cancer Resear…
How to analyze pre-processed RNA-Seq data from GEO based on the deseq R package for filtering and DE analysis
shepherl 4.1k
4 years, 10 months ago
United States
Bioconductor is hiring!!
mpuli011 • 0
4 years, 10 months ago
United States
Nested design- phyloseq_to_deseq
shepherl 4.1k
4 years, 11 months ago
United States
New Package and New Docker Image Submission Deadline for Bioc Release 3.11
NIK • 0
4 years, 11 months ago
United States
Problem installing and loading the package SingleCellExperiment
Jenny Drnevich ★ 2.0k
4 years, 11 months ago
United States
Issues with normalizing viral-infected single cell data
Joseph Fass ▴ 70
4 years, 11 months ago
United States
segfault "memory not mapped" using align from Rsubread
svlachavas ▴ 840
4 years, 11 months ago
Germany/Heidelberg/German Cancer Resear…
Annotation issue while analyzing processed Affymetrix Human Exon 1.0 ST Arrays from Geoquery
adR ▴ 40
4 years, 11 months ago
Germany, München
mcols(object)$betaConv. Use larger maxit argument with nbinomWaldTest")
Konstantinos Yeles ▴ 80
4 years, 11 months ago
Italy
Issues loading a BAM file resulted from featurecounts
adR ▴ 40
4 years, 11 months ago
Germany, München
DESeq2 result extraction
adR ▴ 40
4 years, 11 months ago
Germany, München
Design DESeq2 with one or more continues variables
peter.r.hoyt • 0
4 years, 11 months ago
United States
negative one "-1" values in index files using Rsubread
pedrodcb ▴ 10
4 years, 11 months ago
Canada
How to know if I should use voomWithQualityWeights() or not?
adam_casas • 0
4 years, 11 months ago
Spain
Trouble using affy library
Lucy ▴ 60
4 years, 11 months ago
United Kingdom
DEsingle differential-expression analysis
Leonardo Collado Torres ★ 1.1k
4 years, 11 months ago
United States
[CDSB] Workshop 2020: Building workflows with RStudio and Bioconductor for single cell RNA-seq analysis
omarrafiqued ▴ 50
4 years, 11 months ago
India
Level 3 TCGA tumor samples
Fred Hutch (Recruiting) ▴ 40
4 years, 11 months ago
Seattle, WA
Bioinformatics Analyst I-II - Fred Hutchinson Cancer Research Center (Seattle, WA)
Michael Love 43k
4 years, 11 months ago
United States
hg38 tracks for AnnotationHub
Michael Love 43k
4 years, 12 months ago
United States
Postdoctoral position in statistical genomics (UNC Chapel Hill)
shepherl 4.1k
4 years, 12 months ago
United States
List of Deprecated Packages Bioc 3.11
alan.ocallaghan ▴ 160
4 years, 12 months ago
United Kingdom
Multiple problems with BiocWorkflowTools
svlachavas ▴ 840
4 years, 12 months ago
Germany/Heidelberg/German Cancer Resear…
Weird error in Rstudio trying to retreive and load genomic data from external databases
biomiha ▴ 20
4 years, 12 months ago
UK/Cambridge
BiocParallel with drake hangs
Marco Blanchette ▴ 30
5 years ago
US/Santa Cruz/Dovetail Genomics
col.interactions.types for gviz InteractionTrack from the GenomicInteractions
samwhite ▴ 20
5 years ago
United States
GSEABase - View/extract GO terms mapped to each GOslim
omarrafiqued ▴ 50
5 years ago
India
Query relating pathway enrichment analysis for DEGs using KEGG or any other database.
omarrafiqued ▴ 50
5 years ago
India
Finding enriched pathways from a gene list.
omarrafiqued ▴ 50
5 years ago
India
Mapping of GENE symbols into ENTREZ
Pietro ▴ 40
5 years ago
Italy
All genes display positive fold change in topTable results after limma
Laurent Gatto 1.6k
5 years ago
Belgium
News: Bioinformatics Summer School - July 2020 - UCLouvain (Belgium)
Wuschel ▴ 10
5 years ago
HUJI
DESeq2 plotCounts() function?
Bogdan ▴ 670
5 years ago
Palo Alto, CA, USA
normalization methods for scRNA-seq and RNA-seq in specific cases of increased global transcription
igor ▴ 50
5 years ago
United States
VST for scRNA-seq
maltethodberg ▴ 180
5 years ago
Denmark
GenomicRanges: Find N nearest/preceding/following ranges
Bogdan ▴ 670
5 years ago
Palo Alto, CA, USA
analysis of multiple time points * 2 replicates of scRNA-seq
rproendo ▴ 30
5 years, 1 month ago
United States
Unable to install, update WGCNA and GO.db
bernatgel ▴ 150
5 years, 1 month ago
Spain
PTEN missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
Dorien ▴ 10
5 years, 1 month ago
Netherlands
Time series experiment analysis in DEseq2 without T=0 and three independent experiments with linked samples
anders.tondell ▴ 30
5 years, 1 month ago
Norway
Visualization of Functional Enrichment Result with enrichplot: How to control label size?
Assa Yeroslaviz ★ 1.5k
5 years, 1 month ago
Germany
lfcShrink doesn't work with contrasts
8,352 results • Page 20 of 168
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6