Commentator
Created A Comment With At Least 3 Up-Votes
Awarded 198 times (see all awards). Earned by the
following contributors:
4 years, 6 months ago
The city by the bay
C: Removing cell cycle genes in large data set integration
6 years, 4 months ago
The city by the bay
C: WARNING: remove set.seed usage in R code
6 years, 4 months ago
The city by the bay
C: [limma] Define contrasts for model with covariates
6 years, 7 months ago
The city by the bay
C: How does edgeR cpm function calculate log(CPM) values?
6 years, 7 months ago
The city by the bay
C: cameraPR vs geneSetTest and ROAST/CAMERA in general
7 years, 4 months ago
The city by the bay
limma: same data in different formats produces different DEG-analysis results
7 years, 5 months ago
The city by the bay
limma: same data in different formats produces different DEG-analysis results
7 years, 5 months ago
The city by the bay
C: limma: same data in different formats produces different DEG-analysis results
7 years, 6 months ago
The city by the bay
Filtering lowly expressed genes in voom-limma analysis
7 years, 7 months ago
The city by the bay
Filtering lowly expressed genes in voom-limma analysis
7 years, 7 months ago
The city by the bay
C: limma blocking and including covariates
7 years, 8 months ago
The city by the bay
C: Adjust for multiple batches using combat
8 years, 3 months ago
The city by the bay
C: Filtering lowly expressed genes in voom-limma analysis
8 years, 5 months ago
The city by the bay
C: Does DESeq2 or edgeR take care of random effect in the GLM
8 years, 7 months ago
The city by the bay
Normalization methodology in DESeq/DESeq2 vs edgeR
8 years, 7 months ago
The city by the bay
C: Differing topTable() results with Limma with and without specifying coefficient
8 years, 11 months ago
The city by the bay
C: Big differences in logfoldchange for some genes between edgeR and DESeq2
9 years ago
The city by the bay
C: Normalization methodology in DESeq/DESeq2 vs edgeR
9 years, 2 months ago
The city by the bay
C: LIMMA: interpreting interaction terms in an unbalanced factorial design with rep
9 years, 3 months ago
The city by the bay
edgeR (3.10.2) contrast question for experimental factors combined as a group
9 years, 3 months ago
The city by the bay
C: glmTreat() fails to shrink coefficients?
9 years, 5 months ago
The city by the bay
edgeR (3.10.2) contrast question for experimental factors combined as a group
9 years, 5 months ago
The city by the bay
C: edgeR (3.10.2) contrast question for experimental factors combined as a group
9 years, 9 months ago
The city by the bay
C: What is difference between classic and GLM edgeR
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6